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fix: drop variants whose bytes a file holds
A copy under .variants/ exists to hold a content its primary does not. 29 held bytes another file already carried, under a second or third identity: msx.rom and MSX.ROM variants equal to MSX_8020-20bios.rom, naomi2.zip.da79eca4 whose suffix named the primary's sha1 rather than its own. dedup now removes such a copy, keeping one when only variants hold the content. The LaserActive PAC-S10 BIOS lived only under .variants/ while RetroBat names it without a hash; it moves beside its siblings.
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