chore: refresh source paths and manifests

After the re-profiled armsx1, armsx2, x1-box and rustynes releases.
Manifests generated twice, identical.

install/batocera.json

@@ -5592,6 +5592,7 @@
       "mame4droid-2024",
       "teknoparrot",
       "ume2015",
+      "x1-box",
       "xemu-chihiro"
     ],
     "coco": [

install/knulli.json

@@ -5323,6 +5323,7 @@
       "mame4droid-2024",
       "teknoparrot",
       "ume2015",
+      "x1-box",
       "xemu-chihiro"
     ],
     "coco": [

install/retrobat.json

@@ -3149,6 +3149,7 @@
       "mame4droid-2024",
       "teknoparrot",
       "ume2015",
+      "x1-box",
       "xemu-chihiro"
     ],
     "coco": [